Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter | ASD34_16960 | Not Available | Positive | 4634032 - 4635222 | 40957.0 |
| rnd transporter | ASD34_16965 | Not Available | Positive | 4635243 - 4638353 | 111187.0 |
| tripartite tricarboxylate transporter tcta | ASD34_16970 | Not Available | Negative | 4638441 - 4639964 | 53030.3 |
| tripartite tricarboxylate transporter tctb | ASD34_16975 | Not Available | Negative | 4639978 - 4640529 | 19172.2 |
| c4-dicarboxylate abc transporter substrate-binding protein | ASD34_16980 | Not Available | Negative | 4640673 - 4641632 | 32875.7 |
| two-component system response regulator | ASD34_16985 | Not Available | Positive | 4641776 - 4642456 | 25034.7 |
| histidine kinase | ASD34_16990 | Not Available | Positive | 4642465 - 4643889 | 51619.6 |
| rna-binding protein | ASD34_16995 | Not Available | Positive | 4643882 - 4644379 | 18641.0 |
| polyphosphate kinase | ASD34_17000 | Not Available | Positive | 4644428 - 4645234 | 30797.0 |
| hypothetical protein | ASD34_17005 | Not Available | Negative | 4645257 - 4645937 | 23931.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
