Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter | ASD34_16855 | Not Available | Negative | 4614216 - 4615418 | 41897.9 |
| squalene synthase hpnc | ASD34_16860 | Not Available | Positive | 4615652 - 4616566 | 33940.7 |
| squalene synthase hpnd | ASD34_16865 | Not Available | Positive | 4616563 - 4617402 | 31498.0 |
| hypothetical protein | ASD34_16875 | Not Available | Positive | 4618658 - 4618966 | 11273.9 |
| lysine transporter lyse | ASD34_16880 | Not Available | Negative | 4618982 - 4619623 | 22391.9 |
| nipsnap family containing protein | ASD34_16885 | Not Available | Positive | 4619744 - 4620049 | 11846.1 |
| had family hydrolase | ASD34_16890 | Not Available | Negative | 4620053 - 4620784 | 26476.7 |
| ferrochelatase | ASD34_16895 | Not Available | Positive | 4620800 - 4621834 | 38091.4 |
| hypothetical protein | ASD34_16900 | Not Available | Negative | 4621842 - 4622348 | 18497.3 |
| hydrolase | ASD34_16905 | Not Available | Negative | 4622401 - 4623273 | 31957.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
