Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | ASD34_16750 | Not Available | Positive | 4591697 - 4593697 | 72928.4 |
| copg family transcriptional regulator | ASD34_16755 | Not Available | Positive | 4593694 - 4594158 | 17330.6 |
| conjugal transfer protein trbb | ASD34_16760 | Not Available | Positive | 4594155 - 4595207 | 37005.1 |
| conjugal transfer protein trbc | ASD34_16765 | Not Available | Positive | 4595204 - 4595587 | 13213.5 |
| conjugal transfer protein trbd | ASD34_16770 | Not Available | Positive | 4595584 - 4595856 | 9744.04 |
| conjugal transfer protein trbe | ASD34_16775 | Not Available | Positive | 4595872 - 4598331 | 90603.9 |
| conjugal transfer protein trbj | ASD34_16780 | Not Available | Positive | 4598328 - 4599053 | 26949.1 |
| hypothetical protein | ASD34_16785 | Not Available | Positive | 4599066 - 4599398 | 11598.7 |
| conjugal transfer protein trbl | ASD34_16790 | Not Available | Positive | 4599395 - 4600780 | 45965.8 |
| conjugal transfer protein trbf | ASD34_16795 | Not Available | Positive | 4600805 - 4601503 | 25829.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
