Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | ASD34_16695 | Not Available | Positive | 4573868 - 4574464 | 21152.8 |
| type vi secretion protein | ASD34_16700 | Not Available | Positive | 4574879 - 4576870 | 73618.2 |
| propionate--coa ligase | ASD34_16705 | Not Available | Negative | 4577071 - 4578969 | 69771.4 |
| branched-chain amino acid abc transporter permease | ASD34_16710 | Not Available | Negative | 4581973 - 4582989 | 36551.2 |
| branched-chain amino acid abc transporter permease | ASD34_16715 | Not Available | Negative | 4582986 - 4583867 | 31063.4 |
| amino acid abc transporter substrate-binding protein | ASD34_16720 | Not Available | Negative | 4583945 - 4585207 | 46086.8 |
| hypothetical protein | ASD34_16725 | Not Available | Positive | 4585967 - 4586254 | 10536.8 |
| gntr family transcriptional regulator | ASD34_16730 | Not Available | Negative | 4586369 - 4586929 | 21029.4 |
| cyclopentanol dehydrogenase | ASD34_16740 | Not Available | Positive | 4588531 - 4589286 | 26501.9 |
| entry exclusion lipoprotein trbk | ASD34_16745 | Not Available | Positive | 4591182 - 4591460 | 10249.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
