Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_16495 | Not Available | Negative | 4535320 - 4536138 | 29036.2 |
| hypothetical protein | ASD34_16500 | Not Available | Negative | 4536185 - 4536442 | 9960.15 |
| cytochrome c' | ASD34_16505 | Not Available | Positive | 4536549 - 4536854 | 10530.0 |
| signal transduction histidine kinase | ASD34_16510 | Not Available | Negative | 4536886 - 4537386 | 18397.4 |
| acetyl-coenzyme a synthetase | ASD34_16515 | Not Available | Negative | 4537594 - 4539591 | 72607.0 |
| hypothetical protein | ASD34_16520 | Not Available | Positive | 4539744 - 4540379 | 22998.5 |
| lysr family transcriptional regulator | ASD34_16525 | Not Available | Negative | 4540376 - 4541287 | 32932.7 |
| 3-beta hydroxysteroid dehydrogenase | ASD34_16530 | Not Available | Positive | 4541396 - 4542013 | 21929.2 |
| fumarate hydratase | ASD34_16535 | Not Available | Negative | 4542132 - 4543529 | 49432.0 |
| glycine/betaine abc transporter atp-binding protein | ASD34_16540 | Not Available | Positive | 4544088 - 4545341 | 45132.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
