Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | ASD34_16245 | Not Available | Negative | 4483802 - 4484989 | 42372.3 |
| hypothetical protein | ASD34_16250 | Not Available | Positive | 4485118 - 4485381 | 9539.48 |
| toxin hipa | ASD34_16255 | Not Available | Positive | 4485375 - 4486712 | 48783.5 |
| endonuclease iii | ASD34_16260 | Not Available | Positive | 4486709 - 4487356 | 23802.1 |
| lysozyme inhibitor | ASD34_16265 | Not Available | Positive | 4487378 - 4488232 | 30947.0 |
| phosphoglycerate kinase | ASD34_16270 | Not Available | Negative | 4488243 - 4488812 | 20164.9 |
| cobalamin synthase | ASD34_16275 | Not Available | Negative | 4488809 - 4489603 | 26691.1 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | ASD34_16280 | Not Available | Negative | 4489600 - 4490643 | 35513.2 |
| cobalamin biosynthesis protein cobq | ASD34_16285 | Not Available | Negative | 4490640 - 4492106 | 52025.3 |
| hypothetical protein | ASD34_16290 | Not Available | Positive | 4492196 - 4492435 | 8339.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
