Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_16195 | Not Available | Negative | 4473766 - 4474125 | 12920.4 |
| two-component system response regulator | ASD34_16200 | Not Available | Positive | 4474299 - 4475030 | 27176.9 |
| histidine kinase | ASD34_16205 | Not Available | Positive | 4475108 - 4476529 | 52043.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | ASD34_16210 | Not Available | Negative | 4476545 - 4477036 | 17017.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | ASD34_16215 | Not Available | Negative | 4477033 - 4477746 | 25216.4 |
| transcription-repair coupling factor | ASD34_16220 | Not Available | Positive | 4477865 - 4481347 | 129176.0 |
| phosphoserine phosphatase | ASD34_16225 | Not Available | Positive | 4481344 - 4482057 | 25393.0 |
| lactate dehydrogenase | ASD34_16230 | Not Available | Positive | 4482054 - 4483118 | 37463.0 |
| hypothetical protein | ASD34_16235 | Not Available | Negative | 4483132 - 4483458 | 12253.5 |
| hypothetical protein | ASD34_16240 | Not Available | Positive | 4483570 - 4483797 | 7982.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
