Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbl | ASD34_02045 | Not Available | Negative | 434503 - 435837 | 44802.5 |
| conjugal transfer protein trbj | ASD34_02050 | Not Available | Negative | 435850 - 436578 | 26750.9 |
| conjugal transfer protein trbe | ASD34_02055 | Not Available | Negative | 436575 - 439013 | 89665.9 |
| conjugal transfer protein trbd | ASD34_02060 | Not Available | Negative | 439024 - 439308 | 9975.32 |
| conjugal transfer protein trbc | ASD34_02065 | Not Available | Negative | 439305 - 439697 | 13504.0 |
| conjugal transfer protein trbb | ASD34_02070 | Not Available | Negative | 439694 - 440731 | 36792.8 |
| copg family transcriptional regulator | ASD34_02075 | Not Available | Negative | 440728 - 441192 | 17165.4 |
| conjugal transfer protein trag | ASD34_02080 | Not Available | Negative | 441189 - 443189 | 73216.6 |
| hypothetical protein | ASD34_02085 | Not Available | Negative | 443407 - 443634 | 8473.22 |
| d-alanyl-d-alanine endopeptidase | ASD34_02090 | Not Available | Negative | 443660 - 444574 | 33551.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
