Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglucosamine mutase | ASD34_15995 | Not Available | Negative | 4429587 - 4430924 | 47351.7 |
| dihydropteroate synthase | ASD34_16000 | Not Available | Negative | 4430931 - 4431743 | 28623.4 |
| cell division protein ftsh | ASD34_16005 | Not Available | Negative | 4431849 - 4433765 | 69970.4 |
| rrna methyltransferase | ASD34_16010 | Not Available | Negative | 4433931 - 4434599 | 24191.4 |
| rna-binding protein | ASD34_16015 | Not Available | Positive | 4434633 - 4435112 | 17701.8 |
| glycosyltransferase | ASD34_16020 | Not Available | Positive | 4435115 - 4435873 | 29133.7 |
| hypothetical protein | ASD34_16025 | Not Available | Negative | 4435922 - 4436341 | 15147.1 |
| transcription elongation factor grea | ASD34_16030 | Not Available | Negative | 4436350 - 4436826 | 17176.3 |
| 3-deoxy-d-manno-oct-2-ulosonic acid (kdo) hydroxylase | ASD34_16035 | Not Available | Negative | 4436891 - 4437760 | 32616.9 |
| carbamoyl phosphate synthase large subunit | ASD34_16040 | Not Available | Negative | 4437773 - 4441021 | 117650.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
