Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | ASD34_15840 | Not Available | Negative | 4399566 - 4400225 | 23945.7 |
| histidine kinase | ASD34_15845 | Not Available | Negative | 4400222 - 4401700 | 53420.3 |
| hypothetical protein | ASD34_15850 | Not Available | Positive | 4401762 - 4402829 | 38219.1 |
| gnat family acetyltransferase | ASD34_15855 | Not Available | Negative | 4403042 - 4403572 | 19143.0 |
| exonuclease i | ASD34_15860 | Not Available | Negative | 4403593 - 4405032 | 54288.6 |
| cardiolipin synthase | ASD34_15865 | Not Available | Negative | 4405033 - 4406481 | 53645.8 |
| atp-dependent clp protease atp-binding subunit clpa | ASD34_15870 | Not Available | Negative | 4406593 - 4408914 | 84720.9 |
| atp-dependent clp protease adaptor clps | ASD34_15875 | Not Available | Negative | 4408982 - 4409341 | 13159.8 |
| isocitrate dehydrogenase | ASD34_15880 | Not Available | Negative | 4409995 - 4411254 | 45936.3 |
| cell envelope biogenesis protein tola | ASD34_15885 | Not Available | Positive | 4411474 - 4411812 | 11352.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
