Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | ASD34_15320 | Not Available | Negative | 4295989 - 4296498 | 18408.0 |
| hypothetical protein | ASD34_15325 | Not Available | Negative | 4296503 - 4297048 | 19613.5 |
| hypothetical protein | ASD34_15330 | Not Available | Negative | 4297105 - 4298094 | 35313.2 |
| pilus assembly protein pilv | ASD34_15335 | Not Available | Negative | 4298091 - 4298705 | 21622.7 |
| hypothetical protein | ASD34_15340 | Not Available | Negative | 4298702 - 4299190 | 17431.8 |
| cysteine methyltransferase | ASD34_15345 | Not Available | Positive | 4299571 - 4300128 | 19459.3 |
| mfs transporter | ASD34_15350 | Not Available | Negative | 4300139 - 4301359 | 41195.5 |
| lysr family transcriptional regulator | ASD34_15355 | Not Available | Negative | 4301438 - 4302319 | 32475.4 |
| mfs transporter | ASD34_15360 | Not Available | Positive | 4302460 - 4303572 | 38574.2 |
| pyridoxamine 5'-phosphate oxidase | ASD34_15365 | Not Available | Positive | 4303569 - 4304180 | 21745.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
