Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylcitrate dehydratase | ASD34_01945 | Not Available | Positive | 413949 - 415310 | 47937.9 |
| arylmalonate decarboxylase | ASD34_01950 | Not Available | Negative | 415321 - 416028 | 24900.1 |
| abc transporter substrate-binding protein | ASD34_01955 | Not Available | Negative | 416030 - 417037 | 34735.5 |
| mandelate racemase | ASD34_01960 | Not Available | Negative | 417110 - 418264 | 41924.6 |
| lysr family transcriptional regulator | ASD34_01965 | Not Available | Negative | 418380 - 419267 | 32032.5 |
| lysr family transcriptional regulator | ASD34_01970 | Not Available | Negative | 419281 - 420171 | 32410.2 |
| 3-hydroxyacyl-coa dehydrogenase | ASD34_01975 | Not Available | Negative | 420251 - 421156 | 31729.9 |
| nadph-dependent 7-cyano-7-deazaguanine reductase | ASD34_01980 | Not Available | Negative | 421288 - 422169 | 32787.6 |
| alpha/beta hydrolase | ASD34_01985 | Not Available | Negative | 422166 - 423065 | 31922.0 |
| proline dioxygenase | ASD34_01990 | Not Available | Negative | 423097 - 423939 | 30905.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
