Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | ASD34_01645 | Not Available | Negative | 342990 - 344252 | 44913.8 |
| lyttr family transcriptional regulator | ASD34_01650 | Not Available | Negative | 344249 - 345001 | 27825.2 |
| histidine kinase | ASD34_01655 | Not Available | Negative | 344998 - 346074 | 38348.9 |
| argininosuccinate lyase | ASD34_01660 | Not Available | Positive | 346132 - 347529 | 51380.8 |
| protease | ASD34_01665 | Not Available | Positive | 347563 - 349041 | 55528.3 |
| alpha-ketoglutarate permease | ASD34_01670 | Not Available | Negative | 349095 - 350441 | 48238.5 |
| luxr family transcriptional regulator | ASD34_01675 | Not Available | Negative | 350585 - 351205 | 22566.4 |
| pas domain-containing sensor histidine kinase | ASD34_01680 | Not Available | Negative | 351202 - 353403 | 80785.8 |
| hypothetical protein | ASD34_01685 | Not Available | Negative | 353466 - 354767 | 47933.4 |
| hypothetical protein | ASD34_01690 | Not Available | Negative | 354793 - 355332 | 19990.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
