Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | ASD34_10625 | Not Available | Positive | 3303228 - 3303683 | 16408.6 |
| mfs transporter | ASD34_10630 | Not Available | Positive | 3303813 - 3305129 | 46608.9 |
| mate family efflux transporter | ASD34_10635 | Not Available | Positive | 3305145 - 3306566 | 49093.5 |
| short-chain dehydrogenase | ASD34_10640 | Not Available | Positive | 3306601 - 3307308 | 24023.6 |
| hypothetical protein | ASD34_10645 | Not Available | Negative | 3307318 - 3307647 | 12639.7 |
| hypothetical protein | ASD34_10650 | Not Available | Negative | 3307762 - 3308499 | 26663.9 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | ASD34_10655 | Not Available | Negative | 3308554 - 3309195 | 21624.5 |
| 2-dehydro-3-deoxygalactonokinase | ASD34_10660 | Not Available | Negative | 3309192 - 3310100 | 32087.6 |
| dihydroxy-acid dehydratase | ASD34_10665 | Not Available | Negative | 3310203 - 3311942 | 62996.1 |
| gntr family transcriptional regulator | ASD34_10670 | Not Available | Positive | 3312156 - 3312905 | 27149.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
