Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | ASD34_10570 | Not Available | Positive | 3292738 - 3293745 | 36642.2 |
| phosphogluconate dehydratase | ASD34_10575 | Not Available | Positive | 3293858 - 3295684 | 64278.4 |
| keto-deoxy-phosphogluconate aldolase | ASD34_10580 | Not Available | Positive | 3295675 - 3296316 | 22143.9 |
| pyridoxamine 5-phosphate oxidase | ASD34_10590 | Not Available | Negative | 3297057 - 3297590 | 19618.5 |
| glyoxalase i | ASD34_10595 | Not Available | Negative | 3297646 - 3298059 | 14936.7 |
| glutathione s-transferase | ASD34_10600 | Not Available | Negative | 3298116 - 3298796 | 25284.4 |
| abc transporter | ASD34_10605 | Not Available | Negative | 3298899 - 3299594 | 24805.0 |
| iron abc transporter permease | ASD34_10610 | Not Available | Negative | 3299656 - 3301341 | 58813.1 |
| iron abc transporter substrate-binding protein | ASD34_10615 | Not Available | Negative | 3301377 - 3302438 | 37652.1 |
| aromatic compound catabolic protein | ASD34_10620 | Not Available | Negative | 3302589 - 3303152 | 19761.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
