Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_10365 | Not Available | Positive | 3251749 - 3252114 | 13155.0 |
| hypothetical protein | ASD34_10375 | Not Available | Positive | 3253112 - 3254620 | 54322.2 |
| ligand-gated channel protein | ASD34_10380 | Not Available | Negative | 3254731 - 3256959 | 80989.0 |
| n(5)-hydroxyornithine transformylase pvdf | ASD34_10385 | Not Available | Negative | 3257053 - 3257898 | 31198.7 |
| iron reductase | ASD34_10390 | Not Available | Negative | 3258006 - 3258812 | 29108.2 |
| cyclic peptide transporter | ASD34_10395 | Not Available | Positive | 3258967 - 3260670 | 62067.8 |
| ornithine monooxygenase | ASD34_10400 | Not Available | Positive | 3260721 - 3262022 | 48684.9 |
| hypothetical protein | ASD34_10405 | Not Available | Positive | 3262044 - 3262283 | 8830.49 |
| glutathione s-transferase | ASD34_10410 | Not Available | Negative | 3262311 - 3263015 | 26072.5 |
| luciferase | ASD34_10415 | Not Available | Negative | 3263079 - 3264041 | 34832.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
