Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication/partition related protein | ASD34_10300 | Not Available | Negative | 3229970 - 3230806 | 30300.9 |
| hypothetical protein | ASD34_10305 | Not Available | Negative | 3230837 - 3231475 | 23009.5 |
| rna polymerase subunit sigma-70 | ASD34_10310 | Not Available | Positive | 3231978 - 3232520 | 19955.4 |
| iron dicitrate transport regulator fecr | ASD34_10315 | Not Available | Positive | 3232637 - 3232873 | 9020.21 |
| antibiotic synthesis protein mbth | ASD34_10320 | Not Available | Positive | 3233102 - 3233365 | 10111.7 |
| thioesterase | ASD34_10325 | Not Available | Positive | 3233371 - 3234114 | 27164.9 |
| non-ribosomal peptide synthetase | ASD34_10330 | Not Available | Positive | 3234111 - 3239408 | 192907.0 |
| polyketide synthase | ASD34_10335 | Not Available | Positive | 3239408 - 3243979 | 161215.0 |
| non-ribosomal peptide synthetase | ASD34_10340 | Not Available | Positive | 3243982 - 3247347 | 122463.0 |
| hypothetical protein | ASD34_10360 | Not Available | Positive | 3250403 - 3251692 | 47140.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
