Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | ASD34_10150 | Not Available | Negative | 3198149 - 3199063 | 33458.6 |
| malic enzyme | ASD34_10155 | Not Available | Negative | 3199371 - 3201671 | 82147.5 |
| hydroxylase | ASD34_10160 | Not Available | Positive | 3201891 - 3203228 | 50176.1 |
| 2-hydroxy-3-oxopropionate reductase | ASD34_10165 | Not Available | Negative | 3203327 - 3204244 | 31201.0 |
| hydroxypyruvate isomerase | ASD34_10170 | Not Available | Negative | 3204268 - 3205053 | 28814.5 |
| glyoxylate carboligase | ASD34_10175 | Not Available | Negative | 3205071 - 3206864 | 64674.1 |
| lysr family transcriptional regulator | ASD34_10180 | Not Available | Positive | 3206975 - 3207877 | 32934.8 |
| carotenoid oxygenase | ASD34_10185 | Not Available | Negative | 3208016 - 3209518 | 54626.1 |
| hypothetical protein | ASD34_10190 | Not Available | Negative | 3209529 - 3209966 | 15204.1 |
| hypothetical protein | ASD34_10195 | Not Available | Negative | 3210112 - 3211221 | 39755.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
