Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator | ASD34_10100 | Not Available | Positive | 3189452 - 3190132 | 24633.8 |
| histidine kinase | ASD34_10105 | Not Available | Positive | 3190194 - 3191546 | 49003.8 |
| oxidoreductase | ASD34_10110 | Not Available | Positive | 3191563 - 3191784 | 7799.38 |
| cytidine deaminase | ASD34_10115 | Not Available | Negative | 3191855 - 3192331 | 17281.7 |
| abc transporter permease | ASD34_10120 | Not Available | Negative | 3192343 - 3193113 | 28006.0 |
| nitrate abc transporter atp-binding protein | ASD34_10125 | Not Available | Negative | 3193124 - 3193987 | 32024.9 |
| taurine abc transporter permease | ASD34_10130 | Not Available | Negative | 3193987 - 3195021 | 36276.9 |
| c4-dicarboxylate abc transporter permease | ASD34_10135 | Not Available | Negative | 3195176 - 3196174 | 35541.1 |
| c4-dicarboxylate abc transporter permease | ASD34_10140 | Not Available | Negative | 3196228 - 3197493 | 44331.8 |
| c4-dicarboxylate abc transporter permease | ASD34_10145 | Not Available | Negative | 3197495 - 3198112 | 22751.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
