Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | ASD34_09950 | Not Available | Positive | 3161020 - 3161691 | 23754.0 |
| transcription elongation factor greab | ASD34_09955 | Not Available | Positive | 3161745 - 3162227 | 17775.2 |
| hypothetical protein | ASD34_09960 | Not Available | Negative | 3162504 - 3163013 | 18764.6 |
| sam-dependent methyltransferase | ASD34_09965 | Not Available | Positive | 3163307 - 3163954 | 23397.9 |
| hydrolase nlp/p60 | ASD34_09970 | Not Available | Positive | 3164053 - 3164610 | 19563.6 |
| hypothetical protein | ASD34_09975 | Not Available | Negative | 3164629 - 3165855 | 44893.6 |
| hypothetical protein | ASD34_09980 | Not Available | Negative | 3166038 - 3167417 | 44581.4 |
| hypothetical protein | ASD34_09985 | Not Available | Negative | 3167414 - 3168262 | 31305.6 |
| methylation protein | ASD34_09990 | Not Available | Negative | 3168382 - 3168900 | 17748.4 |
| pilus assembly protein pily | ASD34_09995 | Not Available | Negative | 3168917 - 3172006 | 108658.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
