Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin | ASD34_09090 | Not Available | Positive | 2984588 - 2984848 | 9541.64 |
| protein-export protein secb | ASD34_09095 | Not Available | Positive | 2984976 - 2985440 | 16872.2 |
| glycerol-3-phosphate dehydrogenase | ASD34_09100 | Not Available | Positive | 2985469 - 2986503 | 35044.3 |
| nicotinate-nucleotide pyrophosphorylase | ASD34_09105 | Not Available | Positive | 2986524 - 2987402 | 30893.2 |
| quinolinate synthetase | ASD34_09110 | Not Available | Positive | 2987409 - 2988524 | 39742.6 |
| 6-pyruvoyl tetrahydrobiopterin synthase | ASD34_09115 | Not Available | Negative | 2988535 - 2988897 | 13854.6 |
| 7-carboxy-7-deazaguanine synthase | ASD34_09120 | Not Available | Negative | 2988937 - 2989575 | 23173.7 |
| pantoate--beta-alanine ligase | ASD34_09125 | Not Available | Negative | 2989572 - 2990414 | 30970.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | ASD34_09130 | Not Available | Negative | 2990434 - 2991339 | 31408.1 |
| l-aspartate oxidase | ASD34_09135 | Not Available | Negative | 2991412 - 2993007 | 57435.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
