Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prevent-host-death protein | ASD34_08990 | Not Available | Positive | 2968825 - 2969016 | 7385.73 |
| hypothetical protein | ASD34_08995 | Not Available | Positive | 2969023 - 2969340 | 11486.0 |
| nudix pyrophosphatase | ASD34_09000 | Not Available | Positive | 2969349 - 2969810 | 17224.5 |
| endonuclease | ASD34_09005 | Not Available | Positive | 2969807 - 2970574 | 28708.6 |
| gtp cyclohydrolase | ASD34_09010 | Not Available | Positive | 2970648 - 2971379 | 27658.6 |
| blue light sensor protein | ASD34_09015 | Not Available | Positive | 2971382 - 2971804 | 15243.5 |
| hypothetical protein | ASD34_09020 | Not Available | Positive | 2971908 - 2972789 | 31762.8 |
| hypothetical protein | ASD34_09025 | Not Available | Positive | 2972803 - 2973627 | 29454.3 |
| transporter | ASD34_09030 | Not Available | Positive | 2973766 - 2974260 | 16157.9 |
| hypothetical protein | ASD34_09035 | Not Available | Negative | 2974329 - 2974853 | 18936.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
