Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_01340 | Not Available | Positive | 279700 - 280014 | 11820.2 |
| type ii citrate synthase | ASD34_01345 | Not Available | Positive | 280039 - 281349 | 48639.7 |
| lysr family transcriptional regulator | ASD34_01350 | Not Available | Positive | 281530 - 282474 | 33809.5 |
| isopropylmalate isomerase | ASD34_01355 | Not Available | Positive | 282521 - 283942 | 50861.7 |
| 3-isopropylmalate dehydratase | ASD34_01360 | Not Available | Positive | 283959 - 284609 | 24392.2 |
| 3-isopropylmalate dehydrogenase | ASD34_01365 | Not Available | Positive | 284653 - 285741 | 39172.2 |
| aspartate-semialdehyde dehydrogenase | ASD34_01370 | Not Available | Positive | 285832 - 286977 | 40629.4 |
| hypothetical protein | ASD34_01375 | Not Available | Positive | 287145 - 289904 | 92604.1 |
| trna pseudouridine synthase a | ASD34_01380 | Not Available | Positive | 289936 - 290760 | 30512.3 |
| n-(5'-phosphoribosyl)anthranilate isomerase | ASD34_01385 | Not Available | Positive | 290757 - 291500 | 25570.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
