Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | ASD34_08890 | Not Available | Positive | 2944848 - 2945318 | 17512.5 |
| mechanosensitive ion channel protein mscs | ASD34_08895 | Not Available | Negative | 2945340 - 2947856 | 88340.0 |
| glycerophosphodiester phosphodiesterase | ASD34_08900 | Not Available | Negative | 2947908 - 2948654 | 26777.7 |
| glycerol-3-phosphate transporter atp-binding subunit | ASD34_08905 | Not Available | Negative | 2948658 - 2949665 | 36902.0 |
| glycerol-3-phosphate transporter | ASD34_08910 | Not Available | Negative | 2949668 - 2950519 | 31266.1 |
| glycerol-3-phosphate transporter permease | ASD34_08915 | Not Available | Negative | 2950559 - 2951440 | 32548.2 |
| glycerol-3-phosphate abc transporter substrate-binding protein | ASD34_08920 | Not Available | Negative | 2951539 - 2952849 | 47581.4 |
| d-3-phosphoglycerate dehydrogenase | ASD34_08925 | Not Available | Positive | 2953079 - 2954311 | 43912.1 |
| fad-linked oxidase | ASD34_08930 | Not Available | Positive | 2954440 - 2958318 | 142411.0 |
| hypothetical protein | ASD34_08935 | Not Available | Positive | 2958315 - 2958752 | 15945.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
