Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 2927836 - 2927912 | Not Available |
| octaprenyl diphosphate synthase | ASD34_08795 | Not Available | Negative | 2927962 - 2928954 | 35184.3 |
| 50s ribosomal protein l21 | ASD34_08800 | Not Available | Positive | 2929138 - 2929449 | 11196.7 |
| 50s ribosomal protein l27 | ASD34_08805 | Not Available | Positive | 2929462 - 2929722 | 8933.88 |
| gtpase obg | ASD34_08810 | Not Available | Positive | 2929795 - 2930871 | 38923.9 |
| gamma-glutamyl kinase | ASD34_08815 | Not Available | Positive | 2930952 - 2932091 | 40363.6 |
| hypothetical protein | ASD34_08820 | Not Available | Negative | 2932126 - 2932653 | 19169.7 |
| rna pyrophosphohydrolase | ASD34_08825 | Not Available | Negative | 2932667 - 2933335 | 26221.9 |
| proline--trna ligase | ASD34_08830 | Not Available | Positive | 2933471 - 2935216 | 63818.9 |
| lytic transglycosylase | ASD34_08835 | Not Available | Positive | 2935213 - 2935869 | 24192.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
