Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein e | ASD34_08585 | Not Available | Positive | 2881778 - 2883568 | 65791.9 |
| hypothetical protein | ASD34_08590 | Not Available | Positive | 2883703 - 2884191 | 17226.9 |
| mfs transporter | ASD34_08600 | Not Available | Positive | 2885864 - 2886835 | 34064.4 |
| gamma-glutamyltransferase | ASD34_08605 | Not Available | Positive | 2886858 - 2888471 | 57628.9 |
| multidrug dmt transporter permease | ASD34_08610 | Not Available | Positive | 2888493 - 2889446 | 33763.6 |
| 3-oxoacyl-acp reductase | ASD34_08615 | Not Available | Positive | 2889494 - 2890285 | 26982.3 |
| hypothetical protein | ASD34_08620 | Not Available | Negative | 2890389 - 2891300 | 32771.8 |
| quinone oxidoreductase | ASD34_08625 | Not Available | Positive | 2891424 - 2892407 | 34701.1 |
| hypothetical protein | ASD34_08630 | Not Available | Positive | 2892532 - 2892957 | 15727.8 |
| lysr family transcriptional regulator | ASD34_08635 | Not Available | Negative | 2892914 - 2893840 | 33393.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
