Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ASD34_08485 | Not Available | Negative | 2864568 - 2865596 | 36308.6 |
| branched-chain amino acid abc transporter substrate-binding protein | ASD34_08490 | Not Available | Negative | 2865724 - 2866869 | 40088.4 |
| phenylacetic acid degradation protein | ASD34_08495 | Not Available | Negative | 2866923 - 2868017 | 39869.6 |
| phenylacetate-coa oxygenase subunit paaj | ASD34_08500 | Not Available | Negative | 2868028 - 2868555 | 18930.6 |
| phenylacetic acid degradation protein | ASD34_08505 | Not Available | Negative | 2868552 - 2869331 | 28786.2 |
| phenylacetate-coa oxygenase | ASD34_08510 | Not Available | Negative | 2869346 - 2869642 | 11335.4 |
| phenylacetate-coa oxygenase | ASD34_08515 | Not Available | Negative | 2869639 - 2870652 | 38291.4 |
| phenylacetate--coa ligase | ASD34_08520 | Not Available | Negative | 2870692 - 2872002 | 48145.6 |
| phenylacetic acid degradation protein | ASD34_08525 | Not Available | Negative | 2872016 - 2872462 | 15904.9 |
| enoyl-coa hydratase | ASD34_08530 | Not Available | Negative | 2872464 - 2873267 | 27336.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
