Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase b | ASD34_01290 | Not Available | Negative | 269084 - 271669 | 92500.3 |
| hypothetical protein | ASD34_01295 | Not Available | Negative | 271763 - 272308 | 19292.5 |
| aldolase | ASD34_01300 | Not Available | Negative | 272333 - 273352 | 35766.7 |
| trans-aconitate methyltransferase | ASD34_01305 | Not Available | Negative | 273349 - 274137 | 29294.0 |
| malate dehydrogenase | ASD34_01310 | Not Available | Negative | 274153 - 275139 | 35161.4 |
| gntr family transcriptional regulator | ASD34_01315 | Not Available | Positive | 275322 - 276080 | 28298.2 |
| succinate dehydrogenase | ASD34_01320 | Not Available | Positive | 276315 - 276761 | 16613.6 |
| succinate dehydrogenase | ASD34_01325 | Not Available | Positive | 276775 - 277140 | 13772.4 |
| fumarate reductase | ASD34_01330 | Not Available | Positive | 277147 - 278955 | 65814.4 |
| succinate dehydrogenase | ASD34_01335 | Not Available | Positive | 278978 - 279679 | 26637.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
