Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter atp-binding protein | ASD34_08370 | Not Available | Negative | 2844131 - 2844952 | 29684.8 |
| rpir family transcriptional regulator | ASD34_08385 | Not Available | Positive | 2846537 - 2847454 | 32389.9 |
| lysr family transcriptional regulator | ASD34_08395 | Not Available | Negative | 2848523 - 2849449 | 34155.6 |
| abc transporter substrate-binding protein | ASD34_08400 | Not Available | Positive | 2849580 - 2850473 | 31998.4 |
| aminotransferase | ASD34_08405 | Not Available | Positive | 2850478 - 2851800 | 47908.2 |
| cytochrome c | ASD34_08410 | Not Available | Negative | 2851787 - 2852161 | 13181.8 |
| ferritin | ASD34_08415 | Not Available | Negative | 2852191 - 2852760 | 19594.8 |
| rna polymerase subunit sigma | ASD34_08420 | Not Available | Negative | 2852799 - 2853491 | 25630.5 |
| hypothetical protein | ASD34_08425 | Not Available | Negative | 2853557 - 2854255 | 25745.9 |
| hypothetical protein | ASD34_08430 | Not Available | Negative | 2854252 - 2854758 | 18377.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
