Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | ASD34_08270 | Not Available | Positive | 2823222 - 2825006 | 64937.1 |
| hypothetical protein | ASD34_08275 | Not Available | Positive | 2825200 - 2826237 | 35235.8 |
| signal recognition particle-docking protein ftsy | ASD34_08280 | Not Available | Negative | 2826365 - 2827678 | 45208.9 |
| peptidase m16 | ASD34_08285 | Not Available | Positive | 2827756 - 2829153 | 50376.9 |
| zinc protease | ASD34_08290 | Not Available | Positive | 2829170 - 2830528 | 48057.4 |
| lysr family transcriptional regulator | ASD34_08295 | Not Available | Negative | 2830538 - 2831449 | 32145.7 |
| amino acid transporter | ASD34_08300 | Not Available | Positive | 2831529 - 2832164 | 22091.6 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | ASD34_08305 | Not Available | Positive | 2832205 - 2832867 | 23255.1 |
| phosphopantetheine adenylyltransferase | ASD34_08310 | Not Available | Positive | 2832911 - 2833414 | 18509.4 |
| allophanate hydrolase | ASD34_08315 | Not Available | Positive | 2833455 - 2834102 | 22703.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
