Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_08210 | Not Available | Negative | 2814090 - 2814320 | 8583.09 |
| transmembrane cytochrome oxidase | ASD34_08215 | Not Available | Positive | 2814348 - 2815226 | 31730.2 |
| hypothetical protein | ASD34_08220 | Not Available | Positive | 2815210 - 2815893 | 25256.4 |
| cytochrome c oxidase subunit i | ASD34_08225 | Not Available | Positive | 2815919 - 2817142 | 43798.9 |
| protoheme ix farnesyltransferase | ASD34_08230 | Not Available | Positive | 2817139 - 2818044 | 33066.3 |
| photosynthetic protein synthase i | ASD34_08235 | Not Available | Positive | 2818054 - 2818683 | 22428.0 |
| dna alkylation repair protein | ASD34_08240 | Not Available | Positive | 2818700 - 2819530 | 30719.8 |
| rna polymerase factor sigma-32 | ASD34_08245 | Not Available | Negative | 2819595 - 2820536 | 34505.3 |
| hypothetical protein | ASD34_08260 | Not Available | Negative | 2821889 - 2822353 | 17067.3 |
| luxr family transcriptional regulator | ASD34_08265 | Not Available | Positive | 2822491 - 2823210 | 24840.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
