Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_07855 | Not Available | Positive | 2740100 - 2740501 | 12635.3 |
| peptidoglycan-associated lipoprotein | ASD34_07860 | Not Available | Positive | 2740587 - 2741093 | 18539.1 |
| mur ligase | ASD34_07865 | Not Available | Positive | 2741205 - 2744288 | 113617.0 |
| hypothetical protein | ASD34_07870 | Not Available | Positive | 2744285 - 2744578 | 10794.0 |
| abc transporter | ASD34_07875 | Not Available | Positive | 2744670 - 2746499 | 65192.3 |
| secretion protein hyld | ASD34_07880 | Not Available | Positive | 2746562 - 2747878 | 47884.4 |
| transporter | ASD34_07885 | Not Available | Positive | 2747875 - 2749446 | 56822.6 |
| fis family transcriptional regulator | ASD34_07890 | Not Available | Negative | 2749580 - 2750998 | 51895.1 |
| hypothetical protein | ASD34_07895 | Not Available | Negative | 2753115 - 2753585 | 16337.8 |
| pilus assembly protein tade | ASD34_07900 | Not Available | Negative | 2753591 - 2754067 | 17242.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
