Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_07785 | Not Available | Negative | 2728792 - 2729979 | 46132.0 |
| gcn5 family acetyltransferase | ASD34_07790 | Not Available | Negative | 2730011 - 2730598 | 21789.1 |
| hypothetical protein | ASD34_07795 | Not Available | Negative | 2730656 - 2730910 | 8608.68 |
| aaa family atpase | ASD34_07800 | Not Available | Negative | 2730915 - 2731769 | 32567.5 |
| cytochrome c | ASD34_07805 | Not Available | Positive | 2731920 - 2732612 | 24448.3 |
| protocatechuate 3,4-dioxygenase subunit alpha | ASD34_07810 | Not Available | Negative | 2732700 - 2733311 | 22296.1 |
| protocatechuate 3,4-dioxygenase subunit beta | ASD34_07815 | Not Available | Negative | 2733323 - 2734048 | 27314.2 |
| lysr family transcriptional regulator | ASD34_07820 | Not Available | Positive | 2734188 - 2735141 | 33743.2 |
| hypothetical protein | ASD34_07825 | Not Available | Negative | 2735251 - 2735682 | 16200.1 |
| hypothetical protein | ASD34_07835 | Not Available | Positive | 2736870 - 2737086 | 7118.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
