Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_06920 | Not Available | Positive | 2538148 - 2538780 | 22256.6 |
| competence protein comj | ASD34_06925 | Not Available | Negative | 2538791 - 2539750 | 34469.2 |
| hypothetical protein | ASD34_06930 | Not Available | Positive | 2539937 - 2540500 | 19007.9 |
| hypothetical protein | ASD34_06935 | Not Available | Positive | 2540548 - 2541747 | 42290.2 |
| 50s ribosomal protein l13 | ASD34_06940 | Not Available | Positive | 2541955 - 2542386 | 15776.3 |
| 30s ribosomal protein s9 | ASD34_06945 | Not Available | Positive | 2542399 - 2542791 | 14260.2 |
| iron-sulfur cluster insertion protein erpa | ASD34_06950 | Not Available | Positive | 2542989 - 2543354 | 12937.1 |
| emrb/qaca subfamily drug resistance transporter | ASD34_06955 | Not Available | Positive | 2543448 - 2544881 | 49916.6 |
| anhydro-n-acetylmuramic acid kinase | ASD34_06960 | Not Available | Negative | 2544888 - 2546030 | 39575.3 |
| peptidase m23 | ASD34_06965 | Not Available | Negative | 2546051 - 2547397 | 47815.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
