Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_06820 | Not Available | Positive | 2508152 - 2508340 | 6066.33 |
| amino acid abc transporter substrate-binding protein | ASD34_06825 | Not Available | Negative | 2508357 - 2509487 | 39272.6 |
| excinuclease abc subunit a | ASD34_06830 | Not Available | Positive | 2509673 - 2515504 | 210770.0 |
| ornithine cyclodeaminase | ASD34_06835 | Not Available | Positive | 2515622 - 2516671 | 38109.8 |
| acetylpolyamine aminohydrolase | ASD34_06840 | Not Available | Positive | 2516706 - 2517752 | 37339.9 |
| hypothetical protein | ASD34_06845 | Not Available | Positive | 2517862 - 2518830 | 34299.7 |
| restriction endonuclease subunit m | ASD34_06850 | Not Available | Positive | 2518922 - 2520481 | 57603.5 |
| excinuclease abc subunit c | ASD34_06855 | Not Available | Positive | 2521768 - 2522691 | 33855.2 |
| cell filamentation protein fic | ASD34_06860 | Not Available | Positive | 2522802 - 2523950 | 41603.9 |
| dead/deah box helicase | ASD34_06865 | Not Available | Positive | 2523955 - 2527164 | 119051.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
