Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | ASD34_06665 | Not Available | Positive | 2474072 - 2474515 | 16353.6 |
| carbonate dehydratase | ASD34_06670 | Not Available | Positive | 2474528 - 2475262 | 26669.7 |
| isocitrate dehydrogenase | ASD34_06675 | Not Available | Positive | 2475298 - 2477118 | 70766.7 |
| acetyl-coa acetyltransferase | ASD34_06680 | Not Available | Positive | 2477194 - 2478378 | 40953.5 |
| carboxypeptidase | ASD34_06685 | Not Available | Positive | 2478470 - 2479717 | 43805.3 |
| acyl-coa dehydrogenase | ASD34_06690 | Not Available | Positive | 2479836 - 2480966 | 40182.9 |
| hypothetical protein | ASD34_06695 | Not Available | Positive | 2481275 - 2481706 | 16172.9 |
| thiamine biosynthesis protein thic | ASD34_06700 | Not Available | Positive | 2481928 - 2483811 | 69677.0 |
| had family hydrolase | ASD34_06705 | Not Available | Positive | 2483894 - 2484586 | 24395.2 |
| thioredoxin | ASD34_06710 | Not Available | Positive | 2484685 - 2485011 | 11932.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
