Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | ASD34_06465 | Not Available | Positive | 2429859 - 2430833 | 34609.3 |
| branched-chain amino acid transporter | ASD34_06470 | Not Available | Negative | 2430850 - 2431128 | 10253.8 |
| branched-chain amino acid abc transporter permease | ASD34_06475 | Not Available | Negative | 2431185 - 2431925 | 26579.1 |
| methionyl-trna formyltransferase | ASD34_06480 | Not Available | Negative | 2431925 - 2432872 | 32965.8 |
| hypothetical protein | ASD34_06485 | Not Available | Negative | 2432878 - 2433375 | 18618.0 |
| peptide deformylase | ASD34_06490 | Not Available | Negative | 2433372 - 2433893 | 19258.3 |
| peptidoglycan-binding protein | ASD34_06495 | Not Available | Positive | 2434054 - 2435277 | 44352.9 |
| dna processing protein dpra | ASD34_06500 | Not Available | Positive | 2435311 - 2436453 | 39407.5 |
| protein smg | ASD34_06505 | Not Available | Positive | 2436513 - 2437043 | 19452.1 |
| hypothetical protein | ASD34_06510 | Not Available | Negative | 2437097 - 2439508 | 86767.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
