Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | ASD34_06415 | Not Available | Negative | 2419815 - 2420300 | 17845.8 |
| 1-aminocyclopropane-1-carboxylate deaminase | ASD34_06420 | Not Available | Positive | 2420451 - 2421467 | 36698.1 |
| pyruvate kinase | ASD34_06425 | Not Available | Negative | 2421536 - 2422984 | 51877.9 |
| phosphoglycerate kinase | ASD34_06430 | Not Available | Negative | 2423090 - 2424295 | 41414.9 |
| lysr family transcriptional regulator | ASD34_06435 | Not Available | Negative | 2424387 - 2425295 | 33283.5 |
| glyoxalase | ASD34_06440 | Not Available | Positive | 2425385 - 2425939 | 20306.9 |
| hypothetical protein | ASD34_06445 | Not Available | Positive | 2425932 - 2427053 | 40510.3 |
| fad-binding monooxygenase | ASD34_06450 | Not Available | Positive | 2427061 - 2428713 | 60022.4 |
| hypothetical protein | ASD34_06455 | Not Available | Positive | 2428710 - 2428928 | 7572.95 |
| hypothetical protein | ASD34_06460 | Not Available | Negative | 2429167 - 2429439 | 9747.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
