Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation factor sua5 | ASD34_06365 | Not Available | Negative | 2410672 - 2411673 | 34783.5 |
| phosphoribosylaminoimidazole carboxylase | ASD34_06370 | Not Available | Negative | 2411670 - 2412866 | 42294.0 |
| n5-carboxyaminoimidazole ribonucleotide mutase | ASD34_06375 | Not Available | Negative | 2412863 - 2413408 | 18237.1 |
| thioredoxin | ASD34_06380 | Not Available | Positive | 2413445 - 2414365 | 33839.4 |
| xre family transcriptional regulator | ASD34_06385 | Not Available | Positive | 2414498 - 2414806 | 10861.3 |
| regulator | ASD34_06390 | Not Available | Positive | 2414856 - 2416136 | 46520.6 |
| heat-shock protein | ASD34_06395 | Not Available | Positive | 2416249 - 2416683 | 14871.9 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | ASD34_06400 | Not Available | Negative | 2416690 - 2417598 | 33064.7 |
| fructose-1,6-bisphosphate aldolase | ASD34_06405 | Not Available | Negative | 2417699 - 2418763 | 38215.9 |
| esterase | ASD34_06410 | Not Available | Negative | 2418838 - 2419749 | 32183.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
