Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | ASD34_01050 | Not Available | Positive | 221420 - 222415 | 35478.7 |
| rna polymerase subunit sigma-24 | ASD34_01055 | Not Available | Negative | 222412 - 223707 | 46484.1 |
| dna recombination protein recf | ASD34_01060 | Not Available | Positive | 223749 - 224744 | 37066.9 |
| transcription initiation protein | ASD34_01065 | Not Available | Negative | 224752 - 225171 | 15161.1 |
| dehydrogenase | ASD34_01070 | Not Available | Negative | 225203 - 225625 | 15601.8 |
| glyoxalase | ASD34_01075 | Not Available | Negative | 225749 - 226177 | 15877.9 |
| transglutaminase | ASD34_01080 | Not Available | Negative | 226189 - 227040 | 31671.8 |
| murein biosynthesis protein murj | ASD34_01085 | Not Available | Negative | 227105 - 228658 | 54992.2 |
| 30s ribosomal protein s20 | ASD34_01090 | Not Available | Positive | 228777 - 229091 | 11199.7 |
| hypothetical protein | ASD34_01095 | Not Available | Negative | 229260 - 229598 | 12217.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
