Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotidine 5'-phosphate decarboxylase | ASD34_06315 | Not Available | Negative | 2401107 - 2401931 | 29315.8 |
| uracil-dna glycosylase | ASD34_06320 | Not Available | Negative | 2401964 - 2402797 | 28992.6 |
| ribosomal-protein-alanine acetyltransferase | ASD34_06325 | Not Available | Negative | 2402794 - 2403336 | 19882.9 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | ASD34_06330 | Not Available | Negative | 2403333 - 2404040 | 24303.2 |
| transporter | ASD34_06335 | Not Available | Negative | 2404033 - 2405061 | 35451.3 |
| deor family transcriptional regulator | ASD34_06340 | Not Available | Negative | 2405109 - 2405885 | 26625.2 |
| gdp-mannose pyrophosphatase | ASD34_06345 | Not Available | Positive | 2405964 - 2406551 | 21972.1 |
| peptidase m15 | ASD34_06350 | Not Available | Positive | 2406559 - 2407980 | 50394.4 |
| hypothetical protein | ASD34_06355 | Not Available | Positive | 2408149 - 2409705 | 52671.4 |
| hypothetical protein | ASD34_06360 | Not Available | Negative | 2409744 - 2410583 | 31396.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
