Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_05965 | Not Available | Positive | 2333536 - 2334510 | 34104.5 |
| hypothetical protein | ASD34_05970 | Not Available | Negative | 2334594 - 2336714 | 73077.0 |
| luxr family transcriptional regulator | ASD34_05975 | Not Available | Positive | 2336896 - 2337879 | 36856.9 |
| alcohol dehydrogenase | ASD34_05980 | Not Available | Negative | 2337944 - 2340073 | 76712.6 |
| fis family transcriptional regulator | ASD34_05985 | Not Available | Positive | 2340216 - 2341487 | 45354.0 |
| transcriptional regulator | ASD34_05990 | Not Available | Negative | 2341489 - 2342349 | 30308.0 |
| 3-isopropylmalate dehydratase | ASD34_05995 | Not Available | Positive | 2342460 - 2343752 | 46034.5 |
| 3-isopropylmalate dehydratase | ASD34_06000 | Not Available | Positive | 2343749 - 2344264 | 18670.5 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | ASD34_06005 | Not Available | Positive | 2344359 - 2345240 | 31808.8 |
| hypothetical protein | ASD34_06010 | Not Available | Positive | 2345358 - 2346284 | 31990.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
