Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfur oxidation c-type cytochrome soxx | ASD34_05810 | Not Available | Negative | 2301914 - 2302567 | 23552.7 |
| sulfur oxidation c-type cytochrome soxa | ASD34_05815 | Not Available | Negative | 2302580 - 2303386 | 28922.7 |
| thiosulfate oxidation carrier complex protein soxz | ASD34_05820 | Not Available | Negative | 2303454 - 2303753 | 10778.9 |
| thiosulfate oxidation carrier protein soxy | ASD34_05825 | Not Available | Negative | 2303811 - 2304269 | 15585.8 |
| cytochrome c | ASD34_05830 | Not Available | Negative | 2304289 - 2305341 | 36622.6 |
| sulfite dehydrogenase | ASD34_05835 | Not Available | Negative | 2305325 - 2306686 | 49475.0 |
| cytochrome c | ASD34_05840 | Not Available | Negative | 2306706 - 2307023 | 10655.2 |
| hypothetical protein | ASD34_05845 | Not Available | Negative | 2307168 - 2307638 | 16653.1 |
| mbl fold metallo-hydrolase | ASD34_05850 | Not Available | Negative | 2307635 - 2308594 | 35147.3 |
| hypothetical protein | ASD34_05855 | Not Available | Positive | 2308706 - 2309119 | 14648.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
