Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein kinase | ASD34_05660 | Not Available | Positive | 2268317 - 2269360 | 39237.4 |
| lysr family transcriptional regulator | ASD34_05665 | Not Available | Negative | 2269361 - 2270257 | 32736.8 |
| dna alkylation response protein | ASD34_05670 | Not Available | Positive | 2270348 - 2272057 | 61849.4 |
| abc transporter substrate-binding protein | ASD34_05675 | Not Available | Positive | 2272095 - 2273084 | 34153.2 |
| tctc | ASD34_05680 | Not Available | Positive | 2273116 - 2274075 | 33985.9 |
| hypothetical protein | ASD34_05685 | Not Available | Positive | 2274096 - 2274569 | 16354.6 |
| carnitine dehydratase | ASD34_05690 | Not Available | Positive | 2274566 - 2275711 | 40486.3 |
| hypothetical protein | ASD34_05695 | Not Available | Negative | 2275730 - 2276263 | 16997.6 |
| heat-shock protein hsp90 | ASD34_05700 | Not Available | Negative | 2276260 - 2278305 | 74903.5 |
| iron abc transporter substrate-binding protein | ASD34_05705 | Not Available | Negative | 2278467 - 2279516 | 38086.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
