Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | ASD34_05610 | Not Available | Negative | 2258962 - 2259657 | 25011.9 |
| cytochrome | ASD34_05615 | Not Available | Positive | 2259741 - 2260904 | 41073.4 |
| pyridoxamine 5'-phosphate oxidase | ASD34_05620 | Not Available | Negative | 2260905 - 2261870 | 34292.8 |
| glutathione s-transferase | ASD34_05625 | Not Available | Negative | 2261867 - 2262517 | 23426.4 |
| lysr family transcriptional regulator | ASD34_05630 | Not Available | Positive | 2262623 - 2263531 | 33056.0 |
| nodulation factor abc transporter atp-binding protein nodi | ASD34_05635 | Not Available | Positive | 2263552 - 2264526 | 35599.9 |
| nodulation protein nodj | ASD34_05640 | Not Available | Positive | 2264538 - 2265368 | 30577.1 |
| marr family transcriptional regulator | ASD34_05645 | Not Available | Positive | 2266021 - 2266473 | 16758.5 |
| peroxiredoxin | ASD34_05650 | Not Available | Positive | 2266549 - 2266974 | 14371.2 |
| hypothetical protein | ASD34_05655 | Not Available | Positive | 2267099 - 2268283 | 43202.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
