Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ASD34_05460 | Not Available | Positive | 2228376 - 2229266 | 33016.0 |
| carboxymethylenebutenolidase | ASD34_05465 | Not Available | Negative | 2229319 - 2230002 | 24153.7 |
| 2-hydroxychromene-2-carboxylate isomerase | ASD34_05470 | Not Available | Negative | 2230060 - 2230659 | 21972.3 |
| sugar dehydrogenase | ASD34_05475 | Not Available | Positive | 2230804 - 2231550 | 25576.0 |
| hypothetical protein | ASD34_05480 | Not Available | Positive | 2231554 - 2232207 | 22827.8 |
| hypothetical protein | ASD34_05485 | Not Available | Negative | 2232217 - 2232678 | 17087.6 |
| abc transporter substrate-binding protein | ASD34_05490 | Not Available | Negative | 2232740 - 2233906 | 42562.2 |
| fatty-acid--coa ligase | ASD34_05495 | Not Available | Negative | 2233939 - 2235795 | 68700.6 |
| abc transporter atp-binding protein | ASD34_05500 | Not Available | Negative | 2235804 - 2236577 | 28557.8 |
| abc transporter atp-binding protein | ASD34_05505 | Not Available | Negative | 2236852 - 2237670 | 29809.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
