Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_04900 | Not Available | Negative | 2123702 - 2124076 | 14225.8 |
| gdsl family lipase | ASD34_04905 | Not Available | Negative | 2124189 - 2125463 | 44303.2 |
| carbamoyl-phosphate synthase large subunit | ASD34_04910 | Not Available | Negative | 2125593 - 2128892 | 115403.0 |
| amp-dependent synthetase | ASD34_04915 | Not Available | Negative | 2129082 - 2130686 | 57743.6 |
| tetr family transcriptional regulator | ASD34_04920 | Not Available | Positive | 2130802 - 2131491 | 25673.7 |
| amino acid abc transporter substrate-binding protein | ASD34_04925 | Not Available | Positive | 2131517 - 2132782 | 45081.1 |
| nadph--cytochrome reductase | ASD34_04930 | Not Available | Positive | 2132960 - 2136178 | 118597.0 |
| alpha/beta hydrolase | ASD34_04935 | Not Available | Negative | 2136257 - 2137030 | 27583.2 |
| tetr family transcriptional regulator | ASD34_04940 | Not Available | Negative | 2137115 - 2137750 | 23416.2 |
| poly granule associated family protein | ASD34_04945 | Not Available | Negative | 2137781 - 2138272 | 17135.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
