Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_04800 | Not Available | Negative | 2102228 - 2103154 | 31324.8 |
| tonb-dependent receptor | ASD34_04805 | Not Available | Negative | 2103187 - 2105472 | 82478.8 |
| hypothetical protein | ASD34_04810 | Not Available | Negative | 2105592 - 2105963 | 12789.9 |
| polysaccharide biosynthesis protein gumn | ASD34_04815 | Not Available | Negative | 2105975 - 2107201 | 43294.4 |
| dioxygenase | ASD34_04820 | Not Available | Positive | 2107265 - 2107678 | 15381.3 |
| hypothetical protein | ASD34_04825 | Not Available | Positive | 2107738 - 2108880 | 42058.0 |
| abc transporter substrate-binding protein | ASD34_04830 | Not Available | Negative | 2108995 - 2109969 | 34358.7 |
| hypothetical protein | ASD34_04835 | Not Available | Negative | 2109974 - 2110210 | 8398.85 |
| fad-dependent oxidoreductase | ASD34_04840 | Not Available | Negative | 2110207 - 2111967 | 62582.4 |
| luxr family transcriptional regulator | ASD34_04845 | Not Available | Positive | 2112052 - 2112849 | 28497.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
