Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloride channel protein | ASD34_04590 | Not Available | Negative | 2045826 - 2047574 | 61513.5 |
| gcn5 family acetyltransferase | ASD34_04595 | Not Available | Positive | 2047688 - 2048266 | 21047.2 |
| permease | ASD34_04600 | Not Available | Negative | 2048258 - 2048971 | 24631.2 |
| s-adenosylhomocysteine deaminase | ASD34_04605 | Not Available | Negative | 2048968 - 2050380 | 50204.1 |
| nucleobase:cation symporter | ASD34_04610 | Not Available | Negative | 2050429 - 2051724 | 44762.6 |
| laci family transcriptional regulator | ASD34_04615 | Not Available | Positive | 2051965 - 2053005 | 36499.8 |
| sorbosone dehydrogenase | ASD34_04620 | Not Available | Negative | 2053031 - 2054398 | 47792.9 |
| ala-trna(pro) hydrolase | ASD34_04625 | Not Available | Positive | 2054529 - 2055293 | 27037.3 |
| protein-disulfide reductase | ASD34_04630 | Not Available | Positive | 2055411 - 2057570 | 74693.1 |
| alkyl hydroperoxide reductase | ASD34_04635 | Not Available | Positive | 2057823 - 2058389 | 19817.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
