Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine transporter lyse | ASD34_04540 | Not Available | Positive | 2033366 - 2033998 | 22412.2 |
| hypothetical protein | ASD34_04545 | Not Available | Positive | 2034015 - 2034980 | 34252.6 |
| creatininase | ASD34_04550 | Not Available | Negative | 2034985 - 2035812 | 28764.6 |
| hypothetical protein | ASD34_04555 | Not Available | Positive | 2036143 - 2038677 | 92127.3 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | ASD34_04560 | Not Available | Positive | 2038686 - 2040749 | 76943.1 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | ASD34_04565 | Not Available | Positive | 2040761 - 2042026 | 48291.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | ASD34_04570 | Not Available | Positive | 2042016 - 2042582 | 21110.7 |
| 3-oxoacyl-acp reductase | ASD34_04575 | Not Available | Positive | 2042715 - 2043512 | 27300.1 |
| lysr family transcriptional regulator | ASD34_04580 | Not Available | Negative | 2043809 - 2044717 | 33311.1 |
| nadph:quinone reductase | ASD34_04585 | Not Available | Positive | 2044803 - 2045813 | 35580.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
